EMBO-Course

"Methods for protein simulations and drug design"

Mon, 13/09/2004 - Fri, 24/09/2004

Drug Discovery and Design Center (DDDC)

Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai


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DVs

By the effort of Kunqian Yu, the clips of the EMBO course are collected.

Events
DV
Introduction embo-2004-09-13-introduction.WMV
Sept. 13:
Jeremy Smith
Introduction to protein simulations and drug design
embo-2004-09-13-jeremy.WMV
Sept. 14:
Bert de Groot, Phil Biggin
Introduction to molecular dynamics simulations
embo-2004-09-14-Groot.wmv
Sept. 15:
Daan van Aalten
MD for drug design
embo-2004-09-15-Daan-a.WMV
embo-2004-09-15-Daan.wmv
Gerhard Klebe
Prediction of active sites

embo-2004-09-15-klebe-a.wmv
embo-2004-09-15-klebe-b.wmv
embo-2004-09-17-klebe-b.WMV

Sept. 16:
Jeremy Smith
Protein dynamics and function, Protein dynamical transition
embo-2004-09-16-jeremy-a.WMV
embo-2004-09-16-jeremy-b.WMV
Phil Biggin,Bert de Groot
Membrane protein simulations
embo-2004-09-16-Biggin.wmv
embo-2004-09-16-groot.WMV
Sept. 17:
Phil Biggin
BioSimGrid
embo-2004-09-17-biggin.WMV
Bert de Groot
Essential dynamics
embo-2004-09-17-Groot-b.WMV
embo-2004-09-17-Groot.wmv
Jianpeng Ma
Normal mode analysis
embo-2004-09-17-jianpengma-a.WMV
embo-2004-09-17-jianpengma-b.WMV
Wilfried van Gunstere
Validating MD simulations through comparison with experimental data
embo-2004-09-17-Grunsteren-b.WMV
embo-2004-09-17-gunsteren.WMV
Sept. 20:
Johan Aqvist
Free energy calculation: FEP, LIE
embo-2004-09-20-johan-a.WMV
embo-2004-09-20-johan-b.WMV
embo-2004-09-20-johan-c.WMV
Martin Stahl
Conformational analyses with the Cambridge Structural Database (CSD)
embo-2004-09-20-stahl-a.WMV
embo-2004-09-20-stahl-b.WMV
Sept. 21:
Qi Chen
Docking and scoring
embo-2004-09-21-chenqi-a.WMV
embo-2004-09-21-chenqi.WMV
Martin Stahl
Similarity search
embo-2004-09-22-stahl.WMV
Sept. 22:
Jonathan Essex
Flexible docking
embo-2004-09-22-jonathan-a.WMV
embo-2004-09-22-jonathan-b.wmv
William N. Lipscomb
Drug design for diabetes type II
embo-2004-09-22-lipscomb-a.wmv
embo-2004-09-22-lipscomb-b.wmv
Sept. 23:
Gerrit Groenhof
Hybrid QM/MM simulations with Gromacs, QM/MM application
embo-2004-09-24-gerrit-a.WMV
embo-2004-09-24-gerrit-b.WMV
embo-2004-09-24-gerrit.WMV
Sept. 24:
Ursula Roehtlisberger
CPMD basics, CPMD for enzymatic reactions
embo-2004-09-24-Ursola-a.wmv
embo-2004-09-24-Ursola-b.wmv
embo-2004-09-24-ursula-c.WMV

 


Updated 11/23/2004 , Zhenting Gao